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About the Mouse Brain Architecture Project

The goal of the Mouse Brain Architecture Project is to gain a comprehensive neuroanatomical understanding of the whole mouse brain at the mesoscopic scale[^]. It consists of a high throughput neuro-histological pipeline for doing injection-based tractography, an analysis pipeline for tera-voxel brain volumes and a web portal for data dissemination. The project was initiated with workshops in 2007-08, leading to a position paper[^] proposing brain-wide mesoscale connectivity mapping in vertebrate brains.

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Data Navigation

– Cursor Search: Click on a point to find the coordinates to view injected datasets
– Directory Tree: Use grouping to search for specific regions and areas to access injected dataset information

About the Data

Datasets include mouse information, tracer location, and image details to visualize projections
Specified regions and areas throughout the brain
Projection patterns and defined neuronal populations

3D Cursor

3D Cursor Search:






Data Navigation

– Cursor Search: Click on a point to find the coordinates to view injected datasets
– Directory Tree: Use grouping to search for specific regions and areas to access injected dataset information

About the Data

Datasets include mouse information, tracer location, and image details to visualize projections
Specified regions and areas throughout the brain
Projection patterns and defined neuronal populations
(Based on Allen Atlas version 3)

MBA licensing and citation policy

Material made public on the Brain Architecture Project is licensed under a Creative Commons Attribution-ShareAlike 4.0 (CC-BY-SA) License. You are free to share (copy and redistribute) and adapt (remix, transform, and build upon) the material in any medium or format as long as you attribute the Mouse Brain Architecture Project (MBA) and provide a link to the two URLs above (the MBA and the CC license). If you adapt the MBA material, you must distribute your contributions under the same license as the MBA original.

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